Thunor Core
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Thunor Core Tutorial
Thunor Core Modules Reference
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Index
A
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C
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D
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E
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F
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H
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I
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M
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N
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P
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R
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T
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V
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W
A
aa() (thunor.curve_fit.HillCurveLL4 method)
aa_obs() (in module thunor.curve_fit)
AAFitWarning
adjusted_r_squared() (in module thunor.dip)
assay_names (thunor.io.HtsPandas attribute)
auc() (thunor.curve_fit.HillCurveLL4 method)
AUCFitWarning
C
CannotPlotError
cell_lines (thunor.io.HtsPandas attribute)
col_iterator() (thunor.io.PlateMap method)
convert_ctrp() (in module thunor.converters)
convert_gdsc() (in module thunor.converters)
convert_gdsc_tags() (in module thunor.converters)
convert_teicher() (in module thunor.converters)
ctrl_dip_rates() (in module thunor.dip)
D
dip_assay_name (thunor.io.HtsPandas attribute)
dip_rates() (in module thunor.dip)
doses_unstacked() (thunor.io.HtsPandas method)
DrugCombosNotImplementedError
drugs (thunor.io.HtsPandas attribute)
E
ec() (thunor.curve_fit.HillCurveLL4 method)
expt_dip_rates() (in module thunor.dip)
F
filter() (thunor.io.HtsPandas method)
fit_drc() (in module thunor.curve_fit)
fit_fn() (thunor.curve_fit.HillCurveLL2 class method)
(thunor.curve_fit.HillCurveLL3u class method)
(thunor.curve_fit.HillCurveLL4 class method)
fit_params() (in module thunor.curve_fit)
fit_params_from_base() (in module thunor.curve_fit)
fit_params_minimal() (in module thunor.curve_fit)
format_dose() (in module thunor.helpers)
H
HillCurve (class in thunor.curve_fit)
HillCurveLL2 (class in thunor.curve_fit)
HillCurveLL3u (class in thunor.curve_fit)
HillCurveLL4 (class in thunor.curve_fit)
HillCurveNull (class in thunor.curve_fit)
HtsPandas (class in thunor.io)
I
ic() (thunor.curve_fit.HillCurveLL4 method)
initial_guess() (thunor.curve_fit.HillCurveLL2 class method)
(thunor.curve_fit.HillCurveLL3u class method)
(thunor.curve_fit.HillCurveLL4 class method)
is_param_truncated() (in module thunor.curve_fit)
M
max_fit_evals (thunor.curve_fit.HillCurveLL3u attribute)
module
thunor.converters
thunor.curve_fit
thunor.dip
thunor.helpers
thunor.io
thunor.plots
thunor.viability
N
null_response_fn() (thunor.curve_fit.HillCurve method)
(thunor.curve_fit.HillCurveLL3u static method)
num_wells (thunor.io.PlateMap property)
P
plate() (thunor.io.HtsPandas method)
plate_size_from_num_wells() (thunor.io.PlateMap class method)
PlateData (class in thunor.io)
PlateFileParseException
PlateMap (class in thunor.io)
plot_ctrl_cell_counts_by_plate() (in module thunor.plots)
plot_ctrl_dip_by_plate() (in module thunor.plots)
plot_drc() (in module thunor.plots)
plot_drc_params() (in module thunor.plots)
plot_drug_combination_heatmap() (in module thunor.plots)
plot_plate_map() (in module thunor.plots)
plot_time_course() (in module thunor.plots)
plot_two_dataset_param_scatter() (in module thunor.plots)
plotly_to_dataframe() (in module thunor.helpers)
R
read_hdf() (in module thunor.io)
read_vanderbilt_hts() (in module thunor.io)
row_iterator() (thunor.io.PlateMap method)
T
thunor.converters
module
thunor.curve_fit
module
thunor.dip
module
thunor.helpers
module
thunor.io
module
thunor.plots
module
thunor.viability
module
tyson1() (in module thunor.dip)
V
ValueWarning
viability() (in module thunor.viability)
W
well_id_to_name() (thunor.io.PlateMap method)
well_iterator() (thunor.io.PlateMap method)
well_list() (thunor.io.PlateMap method)
well_name_to_id() (thunor.io.PlateMap method)
write_hdf() (in module thunor.io)
write_vanderbilt_hts() (in module thunor.io)
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